[Bioperl-l] genbank contig parses

[Hilmar Lapp]

On Wednesday, February 12, 2003, at 05:03  AM, Richard Adams wrote:

>     Is there now BioPerl code to deal with join/complement tags and to
> make subseqs with annotation transfer? I've had a look but can't find
> any, but maybe I'm looking in the wrong modules.
>

The location strings are dealt with -- not sure if that's what you 
mean. As for propagating annotation and features for trunc(), subseq(), 
and revcomp(), no, this is not done, as it is non-trivial if you want 
to do it generically. We'd all be glad if someone took this on ...

	-hilmar
-- 
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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