[Bioperl-l] limit on accessing NCBI/GenBank
Nirav Merchant
nirav at public.arl.arizona.edu
Wed Feb 12 09:27:51 EST 2003
>
>myGenBank is another way to keep a local copy of genbank for your own uses
>which uses a combination of a RDBMS and flatfile indexfiles.
>
>-jason
NCBI also provides pre formatted blast databases for download,
ftp://ftp.ncbi.nih.gov/blast/db/FormattedDatabases/
you can use the fastacmd program bundled with ncbi blast to extract
sequence (or parts of)
-Nirav
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