[Bioperl-l] temp file not removed after StandAloneBlast?
Remo Sanges
sanges at biogem.it
Tue Feb 11 11:57:37 EST 2003
Hi all,
I'm using bioperl 1.0.2 on linux and I have a big problem.
After a large number of blastall with StandAloneBlast.pm and BPlite.pm
in a single perl session I haven't other space on my root filesystem.
In this single session my computer wrote up to 1.5 Gb of data.
Where?
I didn't save any blastout file but parsed them via a factory object
creating a little report file of 2 mb.
I have found this message of jason in ml archive
http://bioperl.org/pipermail/bioperl-l/2002-January/007036.html
but this doesn't solve my problem
Perhaps bioperl saves some temp files in a directory different from /tmp
and not always removes before exit?
If yes how or where can I find this files to remove them?
Please help me
at the moment I cannot work on my machine
Thank you
Remo Sanges
Biogem
Naples
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