[Bioperl-l] Mlagan/lagan bioperl object

[Ewan Birney]

On Sun, 2 Feb 2003, Shawn Hoon wrote:

> Cool, very useful, as we are just looking to do some work with it.
> Just a note Ewan, should we instead add this to the Bio::Tools::Run::
> name space under bioperl-run as it is a wrapper more than a parser? I
> can volunteer to integrate this.

Aha. Can we separate out the wrapper to run and hte parser to core?



> 
> cheers,
> 
> shawn
> 
> On Fri, 31 Jan 2003, Stephen Montgomery wrote:
> 
> > Hi-
> > 
> > I figured out that SimpleAlign takes the multi-alignments.  Just warns 
> > you and overwrites if they have the same name.
> > Bio::Tools::Lagan is attached and some hacked up test script for those 
> > wanting to give it a try in their bioperl distro.
> > If it is integrated, I'll CVS in further updates (thinking... damn I 
> > wonder how many people are getting a module they care nothing about in 
> > their mailbox? :) ).  
> > Have a good weekend all.
> > 
> > Cheers,
> > Stephen
> > 
> > -----------------------------
> > Stephen Montgomery
> > Genome Sciences Centre
> > Vancouver, BC Canada
> > -----------------------------
> > 
> 
> -- 
> ********************************
> * Shawn Hoon
> * http://www.fugu-sg.org/~shawnh
> ********************************
> 
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Ewan Birney. Mobile: +44 (0)7970 151230, Work: +44 1223 494420
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