[Bioperl-l] Bundle::Bioperl updated for bioperl-1.4 release

Heikki Lehvaslaiho heikki at nildram.co.uk
Thu Dec 18 13:24:28 EST 2003


Allen,

There is a problem. I can find SVG::Graph in search.cpan.org, but I could not 
install it.  I found out that is an other, conflicting, SVG::Graph module by 
Mike Miller: http://search.cpan.org/~mrmike/ .

	-Heikki

On Thursday 18 Dec 2003 5:08 pm, Allen Day wrote:
> there is a dependency on SVG::Graph 0.01 by module Bio::TreeIO::svggraph.
>
> -allen
>
> > This is the old bundle info:
> > > Bundle id = Bundle::BioPerl
> > >      CPAN_USERID  CRAFFI (Chris Dagdigian <dag at sonsorol.org>)
> > >      CPAN_VERSION 2.05
> > >      CPAN_FILE    C/CR/CRAFFI/Bundle-BioPerl-2.05.tar.gz
> > >      MANPAGE      Bundle::BioPerl - A bundle to install external CPAN
> > > modules used by BioPerl
> > >      CONTAINS     Bundle::LWP File::Temp File::Spec IO::Scalar
> > > IO::String HTTP::Request::Common HTTP::Status LWP::UserAgent
> > > URI::Escape XML::Parser XML::Parser::PerlSAX XML::Writer XML::Node
> > > XML::Twig Text::Iconv Scalar::Util XML::DOM SOAP::Lite GD Storable
> > > Text::Shellwords Data::Stag Graph::Directed
> > >      INST_FILE    /root/.cpan/Bundle/BioPerl.pm
> > >      INST_VERSION 2.05
> >
> > This is the new bundle:
> > > cpan> i Bundle::BioPerl
> > > Strange distribution name [Bundle::BioPerl]
> > > Bundle id = Bundle::BioPerl
> > >      CPAN_USERID  CRAFFI (Chris Dagdigian <dag at sonsorol.org>)
> > >      CPAN_VERSION 2.05
> > >      CPAN_FILE    C/CR/CRAFFI/Bundle-BioPerl-2.05.tar.gz
> > >      MANPAGE      Bundle::BioPerl - A bundle to install external CPAN
> > > modules used by BioPerl
> > >      CONTAINS     Bundle::LWP File::Temp File::Spec IO::Scalar
> > > IO::String HTML::Entities HTML::Parser HTTP::Request::Common
> > > HTTP::Status LWP::UserAgent URI::Escape XML::Parser
> > > XML::Parser::PerlSAX XML::Writer XML::Node XML::Twig Text::Iconv
> > > Scalar::Util XML::DOM SOAP::Lite GD GD::SVG SVG Storable
> > > Text::Shellwords Data::Stag Graph::Directed
> > >      INST_FILE    /usr/lib/perl5/site_perl/5.8.0/Bundle/BioPerl.pm
> > >      INST_VERSION 2.1.0
> >
> > -Chris
> >
> >
> > _______________________________________________
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> > Bioperl-l at portal.open-bio.org
> > http://portal.open-bio.org/mailman/listinfo/bioperl-l
>
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-- 
______ _/      _/_____________________________________________________
      _/      _/                      http://www.ebi.ac.uk/mutations/
     _/  _/  _/  Heikki Lehvaslaiho    heikki_at_ebi ac uk
    _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
   _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
  _/  _/  _/  Cambs. CB10 1SD, United Kingdom
     _/      Phone: +44 (0)1223 494 644   FAX: +44 (0)1223 494 468
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