[Bioperl-l] Bundle::Bioperl updated for bioperl-1.4 release

Allen Day allenday at ucla.edu
Thu Dec 18 12:08:38 EST 2003


On Thu, 18 Dec 2003, Chris Dagdigian wrote:

> 
> Hi folks,
> 
> A potential 1.4 ready Bundle::BioPerl is in CPAN now at:
> 
> http://search.cpan.org/~craffi/Bundle-BioPerl-2.1.0/BioPerl.pm
> 
> Please make sure I got all the dependencies listed. The primary new 
> editions seem to be:
> 
>  HTML::Entities
>  HTML::Parser
>  GD::SVG
>  SVG::

there is a dependency on SVG::Graph 0.01 by module Bio::TreeIO::svggraph.

-allen


> 
> 
> 
> This is the old bundle info:
> 
> > Bundle id = Bundle::BioPerl
> >      CPAN_USERID  CRAFFI (Chris Dagdigian <dag at sonsorol.org>)
> >      CPAN_VERSION 2.05
> >      CPAN_FILE    C/CR/CRAFFI/Bundle-BioPerl-2.05.tar.gz
> >      MANPAGE      Bundle::BioPerl - A bundle to install external CPAN 
> > modules used by BioPerl
> >      CONTAINS     Bundle::LWP File::Temp File::Spec IO::Scalar 
> > IO::String HTTP::Request::Common HTTP::Status LWP::UserAgent URI::Escape 
> > XML::Parser XML::Parser::PerlSAX XML::Writer XML::Node XML::Twig 
> > Text::Iconv Scalar::Util XML::DOM SOAP::Lite GD Storable 
> > Text::Shellwords Data::Stag Graph::Directed
> >      INST_FILE    /root/.cpan/Bundle/BioPerl.pm
> >      INST_VERSION 2.05
> 
> 
> This is the new bundle:
> 
> 
> > cpan> i Bundle::BioPerl
> > Strange distribution name [Bundle::BioPerl]
> > Bundle id = Bundle::BioPerl
> >      CPAN_USERID  CRAFFI (Chris Dagdigian <dag at sonsorol.org>)
> >      CPAN_VERSION 2.05
> >      CPAN_FILE    C/CR/CRAFFI/Bundle-BioPerl-2.05.tar.gz
> >      MANPAGE      Bundle::BioPerl - A bundle to install external CPAN 
> > modules used by BioPerl
> >      CONTAINS     Bundle::LWP File::Temp File::Spec IO::Scalar 
> > IO::String HTML::Entities HTML::Parser HTTP::Request::Common 
> > HTTP::Status LWP::UserAgent URI::Escape XML::Parser XML::Parser::PerlSAX 
> > XML::Writer XML::Node XML::Twig Text::Iconv Scalar::Util XML::DOM 
> > SOAP::Lite GD GD::SVG SVG Storable Text::Shellwords Data::Stag 
> > Graph::Directed
> >      INST_FILE    /usr/lib/perl5/site_perl/5.8.0/Bundle/BioPerl.pm
> >      INST_VERSION 2.1.0
> > 
> 
> 
> -Chris
> 
> 
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