[Bioperl-l] Re: [Bioperl-guts-l] bioperl commit
Aaron J Mackey
amackey at pcbi.upenn.edu
Mon Dec 15 08:01:32 EST 2003
$patch =~ s/E<lt>/E<gt>/g;
On Mon, 15 Dec 2003, Heikki Lehvaslaiho wrote:
>
> heikki
> Mon Dec 15 06:50:38 EST 2003
> Update of /home/repository/bioperl/bioperl-live/Bio/Graphics
> In directory pub.open-bio.org:/tmp/cvs-serv26698/Bio/Graphics
>
> Modified Files:
> Glyph.pm Panel.pm
> Log Message:
> pod fixes
>
> bioperl-live/Bio/Graphics Glyph.pm,1.55,1.56 Panel.pm,1.66,1.67
> ===================================================================
> RCS file: /home/repository/bioperl/bioperl-live/Bio/Graphics/Glyph.pm,v
> retrieving revision 1.55
> retrieving revision 1.56
> diff -u -r1.55 -r1.56
> --- /home/repository/bioperl/bioperl-live/Bio/Graphics/Glyph.pm 2003/12/13 17:17:50 1.55
> +++ /home/repository/bioperl/bioperl-live/Bio/Graphics/Glyph.pm 2003/12/15 11:50:38 1.56
> @@ -1127,7 +1127,7 @@
> This is similar to add_feature(), but the list of features is treated
> as a group and can be configured as a set.
>
> -=item $glyph->E<gt>finished
> +=item $glyph-E<gt>finished
>
> When you are finished with a glyph, you can call its finished() method
> in order to break cycles that would otherwise cause memory leaks.
>
> ===================================================================
> RCS file: /home/repository/bioperl/bioperl-live/Bio/Graphics/Panel.pm,v
> retrieving revision 1.66
> retrieving revision 1.67
> diff -u -r1.66 -r1.67
> --- /home/repository/bioperl/bioperl-live/Bio/Graphics/Panel.pm 2003/12/13 17:17:50 1.66
> +++ /home/repository/bioperl/bioperl-live/Bio/Graphics/Panel.pm 2003/12/15 11:50:38 1.67
> @@ -1264,7 +1264,7 @@
> $width = gdMediumBoldFont->width * length($longest_key) +3;
>
> In order to obtain scalable vector graphics (SVG) output, you should
> -pass new() the -image_class=>'GD::SVG' parameter. This will cause
> +pass new() the -image_class=E<lt>'GD::SVG' parameter. This will cause
> Bio::Graphics::Panel to load the optional GD::SVG module. See the gd()
> and svg() methods below for additional information.
>
> @@ -1495,7 +1495,7 @@
> height() methods first to ensure that the image has sufficient
> dimensions.
>
> -If you passed new() the -image_class=>'GD::SVG' parameter, the gd() method
> +If you passed new() the -image_class=E<lt>'GD::SVG' parameter, the gd() method
> returns a GD::SVG::Image object. This object overrides GD::Image
> methods in order to generate SVG output. It behaves exactly as
> described for GD::Image objects with one exception: it implements and
>
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