[Bioperl-l] running remoteblast

omid gulban gulban at sickkids.ca
Mon Dec 1 14:12:38 EST 2003


Hi,

I would like to know how to run a remoteblast query using bioperl modules. I have looked in the FAQs but the instructions provided were for StandaloneBlast. I followed the instruction by received the following message:


-------------------- WARNING ---------------------
MSG: cannot find path to blastall
---------------------------------------------------

I assume that you need to install blast on your local machine. 

I am new to Bioperl. I don't know what modules to use?
How can I run a simple blast querry using NCBI?


Thanks

ACGT
-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://portal.open-bio.org/pipermail/bioperl-l/attachments/20031201/a8348683/attachment.htm


More information about the Bioperl-l mailing list