[BioPerl] Re: [Bioperl-l] SeqIO BEGIN block kills Gbrowse

[Jason Stajich]

i  guess so - i mean I run gbrowse on bioperl live with no problems at all
so I don't know what would cause it.
-j

On Tue, 12 Aug 2003, Mark Wilkinson wrote:

> i can switch the faulty behaviour back on and send you a URL if you
> like.  All I did was comment-out the eval to solve my immediate problem.
>
> M
>
> On Tue, 2003-08-12 at 15:22, Jason Stajich wrote:
> > It shouldn't print anything b/c it is in an eval block.
> > What does it print to the screen?
> >
> > On Tue, 12 Aug 2003, Mark Wilkinson wrote:
> >
> > > Hi all,
> > >
> > > Just a heads-up that the eval in the BEGIN block of SeqIO.pm mucks-up
> > > the gbrowse CGI (apparently because the error message is printed to the
> > > screen before the CGI header).  I suppose this is something that is best
> > > fixed at the gbrowse end of the stick, but I thought I'd post a note
> > > about it here anyway.  It it doesn't look like it will be an easy thing
> > > to fix given the early point at which that line is going to execute...
> > >
> > > M
> > >
> > >
> >
> > --
> > Jason Stajich
> > Duke University
> > jason at cgt.mc.duke.edu
> > _______________________________________________
> > Bioperl-l mailing list
> > Bioperl-l at portal.open-bio.org
> > http://portal.open-bio.org/mailman/listinfo/bioperl-l
>

--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu