[Bioperl-l] SeqIO profiling

[Hilmar Lapp]

On Sunday, September 22, 2002, at 02:23 PM, Ewan Birney wrote:

> On Sun, 22 Sep 2002, Jason Stajich wrote:
>
>
>
>>
>> Additionally I just made the seqfeature collection instantiation 
>> lazy so
>> it is only built when requested in Bio::Seq.  Don't think we'll 
>> see much
>> improvement but would be good to test how much effect it had on fasta
>> format sequence parsing.
>>
>
>
> I wanted to do the same thing with the Bio::AnnotationCollection
> instantion as well...

That's what Jason did -- Bio::Seq doesn't use SeqFeature::Collection 
yet ... (hmm ... should it do so?)

	-hilmar
--
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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