[Bioperl-l] substitutions

Hilmar Lapp hlapp@gnf.org
Mon, 9 Sep 2002 23:41:40 -0700


On Monday, September 9, 2002, at 11:15  PM, Hilmar Lapp wrote:

>
> Aaahh, now I'm getting what's the problem: if the location is 
> (200..300) then $start and $end would only have one parenthesis. 
> And since one of the misc.feature locations is J00194:(100..202) 
> you would run into this situation. Actually, according to 
> http://www.ncbi.nlm.nih.gov/collab/FT/#location the parentheses are 
> not allowed here, but I'm going to fix the parser to allow for this.
>
>

Fixed and committed, also added tests. Aaron, can you check whether 
that makes the warnings go away (hopefully it does ...)?

	-hilmar
--
-------------------------------------------------------------
Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
-------------------------------------------------------------