[Bioperl-l] remoteblast result in text format

[Wiepert, Mathieu]

$v is just a way to either print out messages or not.  So you can toggle whether you want the messages like
"waiting ..."

Just a silly way to control that I guess, but nonetheless..

> >> my $v = 1;

change to 0 and you can suppress all the messages to follow.

> 
> ok for init
> 
> >> my $str = Bio::SeqIO->new(-file=>'amino.fa' , '-format' => 
> >>   print STDERR "waiting..." if( $v > 0 );
> 
> tested here
> 
> >>         print STDERR "." if ( $v > 0 );
> 
> tested again
> 
> >>         while ( my $hit = $result->next_hit ) {
> >>           next unless ( $v > 0);
> 
> tested, $v is never modified in the program
>