[Bioperl-l] BioGraphics highlight segment

[Marco Aurelio Valtas Cunha]

Hi Lincoln,

That's the answer I was looking for.

Thank You.
Marco.


Lincoln Stein wrote:
> The heterogeneous_segments glyph looks for a single feature containing 
> multiple subfeatures, and then changes the color depending on the method tag 
> of the subfeature.
> 
> Lincoln
> 
> On Wednesday 06 November 2002 04:07 pm, Marco Aurelio Valtas Cunha wrote:
> 
>>Hi Robson,
>>
>>I've already though that, this is my backup plan since I'm planning yet and
>>no code was written. If no glyph fits in I'll have to use this method.
>>
>>Tahnk you.
>>Marco.
>>
>>Robson Francisco de Souza wrote:
>>
>>>	Hi Marco,
>>>
>>>On Wed, 6 Nov 2002, Marco Aurelio Valtas Cunha wrote:
>>>
>>>>Hi all,
>>>>
>>>>A Bio::Graphics question,
>>>>
>>>>I'm trying to draw is something like:
>>>>
>>>>----------------------------------- My anchor
>>>>     ___________________________
>>>>
>>>>    |_____|XXXXXXXXXXX|_________|   My track
>>>>
>>>>Note that at some point my track changes its color, then get the color
>>>>back. The information for such change is just coordnates it's not a
>>>>SeqFeature like CDS or else. So what I'm looking for is something like
>>>>this:
>>>>
>>>> "my track has a lenght of 1000 and I want highlight the 300..500
>>>>segment of it."
>>>>
>>>>Sugestions?
>>>
>>>	Did you try to create a SeqFeature from your coordinates and add
>>>them to the panel using add_track with option '-bump=>0'? I'm not sure it
>>>works, but I would try it.
>>>					Robson
>>>
>>>
>>>>Thank you,
>>>>Marco.
>>>>
>>>>--
>>>>   _ _ _ _ _ Marco A Valtas Cunha    
>>>>http://scarecrow.fmrp.usp.br/~mavcunha/ /  '`    / Lab de Bioinformatica
>>>>   http://bit.fmrp.usp.br
>>>> /  '  `  /  Hemocentro de Rib Preto  http://ctc.fmrp.usp.br
>>>>/_ _`..'_/   Fax: 55 16 3963-9309     Tel: 55 16 3963-9300 R:9603
>>>>
>>>>
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> 
> 
> 

-- 
    _ _ _ _ _ Marco A Valtas Cunha     http://scarecrow.fmrp.usp.br/~mavcunha/
   /  '`    / Lab de Bioinformatica    http://bit.fmrp.usp.br
  /  '  `  /  Hemocentro de Rib Preto  http://ctc.fmrp.usp.br
/_ _`..'_/   Fax: 55 16 3963-9309     Tel: 55 16 3963-9300 R:9603