[Bioperl-l] Bio::Tools::Run::Alignment::Clustalw & Phylogenetic trees

[Jason Stajich]

Shawn, Elia, Jerm and the Fugu/Singapore group have been adding wrappers
to PHYLIP apps for seq distance calculations and and Tree building.

What would be helpful is to describe some use cases for what you would
like to learn from the trees.  There have been some talk of building
ortholog predictions - the fugu guys may have already started on the alg
building?

-jason

On Sat, 25 May 2002, Eduardo Arino de la Rubia wrote:

> Greetings;
>
> I was wondering if there was any work currently being done in extending
> the phylogenetic tree capabilities of clustalw to BioPerl.  If there is
> any work being done in this, what can I do to help it along / use it?
>
> Thank you,
>
> Eduardo.
>
> The meta-Turing test counts a thing as intelligent if it seeks to devise
> and apply Turing tests to objects of its own creation.
> -- Lew Mammel, Jr.
>
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-- 
Jason Stajich
Duke University
jason at cgt.mc.duke.edu