[Bioperl-l] Sequence names and descriptions in Bio::SearchIO

Andy Nunberg anunberg@oriongenomics.com
Wed, 15 May 2002 11:47:42 -0500


Hi,
 I am trying to determine how names and descriptions for sequences are
implemented in
SearchIO blast objects.
I seem to be getting the entire definition line of the query and truncation
of the hit description,where the description of the hit is more than one
line in the raw blast report. 

accessing the query name from the result object or hsp object gives the
same result

Andy
*******************************************************************
Andy Nunberg, Ph.D
Computational Biologist
Orion Genomics, LLC 
(314) 615-6989
http://www.oriongenomics.com