[Bioperl-l] underscores in names from AlignIO::phylip.pm

[Aaron J Mackey]

Does anyone object to this patch?  I see that underscores are used to
remove spaces/illegal characters from sequence names (and I also see where
the trailing spaces are being added), but I wonder if anyone is actually
depending on their seq names to be exactly 10 chars long ... ?

Index: phylip.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/AlignIO/phylip.pm,v
retrieving revision 1.12
diff -r1.12 phylip.pm
132a133
>           $name =~ s/_+$//; # remove any trailing _'s

-Aaron


-- 
 Aaron J Mackey
 Pearson Laboratory
 University of Virginia
 (434) 924-2821
 amackey@virginia.edu