[Bioperl-l] Bug in remote Blasts scripts

[Beth Kidd]

I did the same to get it working. Looks as if NCBI changed the HTML a
little.

Beth Kidd



----- Original Message -----
From: "Danny Navarro" <d.navarro@bmb.sdu.dk>
To: "Bioperl" <bioperl-l@bioperl.org>
Sent: Thursday, February 14, 2002 1:48 PM
Subject: [Bioperl-l] Bug in remote Blasts scripts


> Hi All,
>
> I am a undergraduate student in biochemistry and I am not very good in
> programming yet. Playing with the remote Blast scripts I found that the
> retrieve_blast.pl script didn't work. The output was like this:
>
> Can't get RID from the input data.
>
> I've just changed the regexp for catching the RID:
>
> Original:
> /RID" VALUE="(\S+)"/s
>
> Changed:
> /name="RID" type="hidden" value="(\S+)"/s
>
> ...And now it works fine. At least for genbank.
>
> Is this a bug? I am doing something wrong? Should I submit to the
> mailing list if I find more things like this?
>
> Danny
>
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l@bioperl.org
> http://bioperl.org/mailman/listinfo/bioperl-l
>