[Bioperl-l] [Bioperl-guts-l] Notification: incoming/1080 (fwd)
Jason Stajich
jason@cgt.mc.duke.edu
Sat, 9 Feb 2002 15:11:19 -0500 (EST)
Double check that XML::Parser::PerlSAX is installed.
We probably aren't being explicit enough in the Makefile warnings as to
what needs to be installed.
You may find it much easier if you use the CPAN bundle to install the
related modules:
% perl -MCPAN -e shell
CPAN> install Bundle::BioPerl
Double check that XML::Writer is definitely installed - I get seg faults
(on linux) when the tests are run in CPAN for me, but if I force it
through all appears to be fine.
(Note to Chris D - we need to make sure the bundle is definitely up to
date for 1.00)
-jason
--
Jason Stajich
Duke University
jason@cgt.mc.duke.edu
---------- Forwarded message ----------
Date: Sat, 9 Feb 2002 12:51:07 -0500
From: bioperl-bugs@bioperl.org
To: bioperl-guts-l@bioperl.org
Subject: [Bioperl-guts-l] Notification: incoming/1080
JitterBug notification
new message incoming/1080
Message summary for PR#1080
From: hu@pic.ansci.iastate.edu
Subject: bioperl installation
Date: Sat, 9 Feb 2002 12:51:06 -0500
0 replies 0 followups
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>From hu@pic.ansci.iastate.edu Sat Feb 9 12:51:06 2002
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Date: Sat, 9 Feb 2002 12:51:06 -0500
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From: hu@pic.ansci.iastate.edu
To: bioperl-bugs@bioperl.org
Subject: bioperl installation
Full_Name: Zhiliang Hu
Module:
Version: 0.72
PerlVer: 5.6
OS: RedHat lunix 7.0
Submission from: pic.ansci.iastate.edu (129.186.111.207)
I have already installed XML::Node, XML::Writer, and IO::String using standard
"perl -MCPAN -e 'modual_names'", and the "make test" on bioperl still
complains:
"The XML-format conversion requires the CPAN modules XML::Node, XML::Writer, and
IO::String to be installed on your system, which they probably aren't. Skipping
these tests."
I wonder why?
Zhiliang
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