[Bioperl-l] requesting NT files from Genbank

Heikki Lehvaslaiho heikki@ebi.ac.uk
09 Feb 2002 13:24:33 +0000


Noah,

Read my answer to Xiaowu earlier today!

	-Heikki

On Sat, 2002-02-09 at 12:47, Noah Zaitlen wrote:
> I am trying to use the GenBank database acess modules to get NT_ files from 
> NCBI.  It works fine for other file types (i.e. the ones used in 
> examples/getGenBank.pl).  I tried the fix suggested in GenBank.pm
> 
> $gb-E<gt>request_format('fasta')
> 
> However, I get this error when I try to run it:
> 
> Unrecognized file test: -E at getGenBank.pl line 15.
> 
> Do you know how to fix this?
> 
> Thanks,
>     Noah Z.
> 
> 
> 
> 
> 
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-- 
______ _/      _/_____________________________________________________
      _/      _/                      http://www.ebi.ac.uk/mutations/
     _/  _/  _/  Heikki Lehvaslaiho          heikki@ebi.ac.uk
    _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
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