[Bioperl-l] Re: Substitution matrix format for Bio::Tools::pSW (Wise2)

[Michal Kurowski]

Ewan Birney [birney@ebi.ac.uk] wrote:

> 
> how many people use pSW in anger?
> 

Sorry Ewan, but there are some people who do find it useful.
I've heard Perl6 will have no XS, so someone could rewrite it for Parrot
;-).

More seriously, pSW is able to return nice SimpleAlign objects and
bl2seq for example can be really tricky when it comes to it.


Cheers,

-- 
Michal Kurowski
<michal@orfeus.bioinfo.pl>