[Bioperl-l] option for stupid translation

Heikki Lehvaslaiho heikki@ebi.ac.uk
Fri, 19 Oct 2001 11:22:10 +0100


Ewan Birney wrote:
> 
> On Fri, 19 Oct 2001, Elia Stupka wrote:
> 
> > > Did you notice that CodonTable has a method translate_strict()?
> > > Go ahead and commit.
> >
> > Thanks, didn't notice, so we just add an optional argument to
> > seq->translate, which if called will do a translate_strict on the
> > codontable.
> 
> Couldn't we get the Ensembl module to call translate_strict?

Might be the best way of doing it. 

> I just don't want bioperl->translate function to keep growing in
> arguments...

It is pretty bad already... 8-)

	-Heikki
 
> >
> > Elia
> >
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> -----------------------------------------------------------------
> Ewan Birney. Mobile: +44 (0)7970 151230, Work: +44 1223 494420
> <birney@ebi.ac.uk>.
> -----------------------------------------------------------------

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