[Bioperl-l] parse psiblast reports

Geetha Vasudevan geethav@incyte.com
Thu, 18 Oct 2001 11:40:03 -0700


I am trying to parse psiblast reports for the HSPs of the query and the
subject sequences. Is it possible to do this using BPpsilite ?
something like $hsp->seq('query')->layout('fasta') and
$hsp->('sbjct')->layout('fasta') which I find only in blast.pm and not
for psiblast.

Any help would be highly appreciated.
Thank You.
-Geetha Vasudevan.