[Bioperl-l] BPbl2seq

[Jason Eric Stajich]

yikes, that is annoying!  Can you report which version of bioperl you are
using or better yet which version of BPbl2seq

% perldoc -m Bio::Tools::BPbl2seq | grep "Id"

I seem to remember having this fixed.

On Tue, 13 Nov 2001, David Martin wrote:

> I am having some trouble with BPbl2seq. It doesn't want to read an empty
> alignment and dies nastily, killing my script. Now, in principle the
> analysis I am doing shouldn't give empty (ie non matching) results, but in
> practice it does.
>
> Any clues on how I can get the parser to not choke but be able to be
> queried to see whether it has found a match in the output or not?
>
> I don't want to have to keep restarting the script as I have about 75K
> comparisons to run through.
>
> ..d
>
>
>
> ----------------------------------
> David Martin PhD
> Bioinformatics Scientific Officer
> Wellcome Trust Biocentre, Dundee
> ----------------------------------
>
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-- 
Jason Stajich
Duke University
jason@cgt.mc.duke.edu