[Bioperl-l] [PATCH] gaps in BPlite

[Kristian Vlahovicek]

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Hello,

I'm looking for a kind soul to apply two patches, making the BPlite
gaps-aware (added $hsp->gaps method). There's also a small bugfix to the 
E-value parsing (for large E-vals ncbi blast changes column alignment).

Files to be patched are Bio/Tools/PBlite/HSP.pm (HSP.patch) &
Bio/Tools/BPlite/Sbjct.pm (Sbjct.patch). I diff-ed them against the newest
CVS snapshot.

Kris



--
Dr. sc. Kristian Vlahovicek	
Protein structure & bioinformatics	Phone:	+39 0403757354
ICGEB					Fax:	+39 040226555
Padriciano 99				E-mail:	kristian@icgeb.trieste.it
Trieste 34012 Italy			Web: http://www.icgeb.trieste.it/dna

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