[Bioperl-l] make test problems

[Peter Schattner]

Hi

I've been attempting to resolve the BPlite bug(s) (eg Bug # 885).
However, now I've got a problem which has me completely stalled.  I just
upgraded to Redhat 7.0 (which I probably shouldn't have done but seemed
like a good idea at the time. I was already running perl 5.6)  Now when
I do "make test" for bioperl-0.6.2, I get the following errors:

[peter@pschattner bioperl-0.6.2]$ make test
PERL_DL_NONLAZY=1 /usr/local/bin/perl -Iblib/arch -Iblib/lib
-I/usr/local/lib/perl5/5.6.0/i686-linux -I/usr/local/lib/perl5/5.6.0 -e
'use Test::Harness qw(&runtests $verbose); $verbose=0; runtests @ARGV;'
t/*.t
Can't load '/usr/local/lib/perl5/5.6.0/i686-linux/auto/IO/IO.so' for
module IO: symbol fsetpos64, version GLIBC_2.1 not defined in file
libc.so.6 with link time reference at
/usr/local/lib/perl5/5.6.0/i686-linux/XSLoader.pm line 73.
 at /usr/local/lib/perl5/5.6.0/i686-linux/IO.pm line 9
Compilation failed in require at
/usr/local/lib/perl5/5.6.0/i686-linux/IO/Handle.pm line 241.
BEGIN failed--compilation aborted at
/usr/local/lib/perl5/5.6.0/i686-linux/IO/Handle.pm line 241.
Compilation failed in require at
/usr/local/lib/perl5/5.6.0/i686-linux/IO/Seekable.pm line 51.
BEGIN failed--compilation aborted at
/usr/local/lib/perl5/5.6.0/i686-linux/IO/Seekable.pm line 51.
Compilation failed in require at
/usr/local/lib/perl5/5.6.0/i686-linux/IO/File.pm line 112.
BEGIN failed--compilation aborted at
/usr/local/lib/perl5/5.6.0/i686-linux/IO/File.pm line 112.
Compilation failed in require at
/usr/local/lib/perl5/5.6.0/FileHandle.pm line 9.
Compilation failed in require at
/usr/local/lib/perl5/5.6.0/Test/Harness.pm line 7.
BEGIN failed--compilation aborted at
/usr/local/lib/perl5/5.6.0/Test/Harness.pm line 7.
Compilation failed in require at -e line 1.
BEGIN failed--compilation aborted at -e line 1.
make: *** [test_dynamic] Error 255

The same thing happens when I try to make & test bioperl-live.

So my questions are:

Does anyone know how to get rid of this error?

Is anyone running bioperl under Redhat 7.0 and are there any special
tricks needed to make that happen.

Thanks folks

Peter