[Bioperl-l] New modules for STRIDE and DSSP output

[Kris Boulez]

Quoting Ewan Birney (birney@ebi.ac.uk):
> 
> 
> Not so nice. -noatom => 1 is probably as useful and much simpler.

A structIO handle now has -noatom and -noheader attributes, disabling
creation of atom objects and parsing headers respectively.
Specifying -noatom reduces parsing time from 10 to 3 seconds. -noheader
has relatively little impact.

You can now also get at the sequence as specified in the SEQRES record.

  my $pseq = $entry->seqres("A");

  # $pseq is a PrimarySeq object containing the sequence of chain A


Kris,