[Bioperl-l] New modules for STRIDE and DSSP output

Ewan Birney birney@ebi.ac.uk
Mon, 3 Dec 2001 10:00:04 +0000 (GMT)


Another option (which might get messy, but still be useful) is for the
"atom" objects to hold onto just their line in PDB file without parsing it
- when a client object walks into the atom object and asks for actual
information then the atom object parses the line, registers itself with
the parent object (yikes - can we do this without cycles - there is
actually a design pattern to do this) and then gives out the right info.


Not so nice. -noatom => 1 is probably as useful and much simpler.



your call Kris 





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Ewan Birney. Mobile: +44 (0)7970 151230, Work: +44 1223 494420
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