Bioperl: GFFconversion (fwd)
Richard Bruskiewich
rbsk@sanger.ac.uk
Fri, 14 Jan 2000 10:17:39 +0000 (GMT)
Hello everyone:
Have any of you coded such a beast in EnsEMBL, Bioperl or raw Perl
(or similar) yet? I haven't (yet) had the time to do the job in EMBOSS.
Cheers,
========================================================
Dr. Richard Bruskiewich <rbsk@sanger.ac.uk>
WWW: http://www.sanger.ac.uk/Users/rbsk/
Human Analysis/Bioinformatics
The Sanger Centre Tel: +44-(0)1223-834244
Wellcome Trust Genome Campus, Fax: +44-(0)1223-494919
Hinxton, Cambridge CB10 1SA
United Kingdom
========================================================
---------- Forwarded message ----------
Date: Thu, 13 Jan 2000 13:11:27 +0100
From: mplatzer <mplatzer@imb-jena.de>
To: rbsk@sanger.ac.uk
Subject: GFFconversion
Dear Richard,
I'm wondering whether there are GFF conversion utilities available other
than ACDB2GFF and the tools from Ian Holmes?
I would be particularly interested in the conversion from
GenBank/EMBL/ASN.
Thank you in advance,
Matthias Platzer
Department of Genome Analysis
Institute of Molecular Biotechnology
P.O.Box 100813, D 07708 Jena
voice : int+49.3641.656254
fax : int+49.3461.656255
E-mail: mplatzer@imb-jena.de
www : http://genome.imb-jena.de/
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