Bioperl: GFFconversion (fwd)

Richard Bruskiewich rbsk@sanger.ac.uk
Fri, 14 Jan 2000 10:17:39 +0000 (GMT)


Hello everyone:

Have any of you coded such a beast in EnsEMBL, Bioperl or raw Perl 
(or similar) yet? I haven't (yet) had the time to do the job in EMBOSS.

Cheers,
========================================================
Dr. Richard Bruskiewich		<rbsk@sanger.ac.uk>
	WWW: http://www.sanger.ac.uk/Users/rbsk/
Human Analysis/Bioinformatics
The Sanger Centre		Tel:  +44-(0)1223-834244
Wellcome Trust Genome Campus,	Fax:  +44-(0)1223-494919
Hinxton, Cambridge   CB10 1SA
United Kingdom
========================================================

---------- Forwarded message ----------
Date: Thu, 13 Jan 2000 13:11:27 +0100
From: mplatzer <mplatzer@imb-jena.de>
To: rbsk@sanger.ac.uk
Subject: GFFconversion

Dear Richard,

I'm wondering whether there are GFF conversion utilities available other
than ACDB2GFF and the tools from Ian Holmes?

I would be particularly interested in the conversion from
GenBank/EMBL/ASN.

Thank you in advance,


Matthias Platzer

Department of Genome Analysis
Institute of Molecular Biotechnology
P.O.Box  100813, D 07708 Jena
voice : int+49.3641.656254
fax   : int+49.3461.656255
E-mail: mplatzer@imb-jena.de
www   : http://genome.imb-jena.de/





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