Bioperl: Question: reading in blast results from scalar?
David Block
dblock@gene.pbi.nrc.ca
Tue, 15 Feb 2000 10:50:13 -0600 (CST)
This may be a naive answer, but could you just print the scalar to a file
(or STDOUT) and then pass it along (pipe it)?
-Dave
On Tue, 15 Feb 2000, Nathan O. Siemers wrote:
>
> Perhaps this is a general perl question.
>
> How does one submit a blast output for parsing, etc, using
> Blast.pm, when you have stored the blast result itself into a
> scalar, rather than a file?
>
> Thanks,
>
> nathan
>
> --
> N a t h a n O . S i e m e r s
> Bioinformatics
> Division of Applied Genomics
> Bristol-Myers Squibb Pharmaceutical Research Institute
> Hopewell Building 3B, P.O. Box 5400, Princeton, NJ 08543-5400
> 609 818-6568
> siemersn@bms.com
>
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