[Bioperl-l] newbie question

Martin Schmidt mcs2+@pitt.edu
Thu, 14 Dec 2000 12:26:21 -0500


Hi,
I am just getting started with BioPerl and
am unable to get any of it to compile.
Just for starters, I have tried to use the
restriction.pl script that comes with BioPerl
release 6.2

I changed the line...
use lib "/home/sac";

to

use lib "macintosh HD:MacPerl:bioperl-0.6.2:libwww-perl-5.48:lib";

and this does not give an error message.

The next line does give an error.

use Bio::Seq;

It says  "# Can't locate Bio/Seq.pm in @INC.

I can't find 'Bio::Seq' in the BioPerl
package, nor can I find it at the BioPerl
web site.

Any advice would be appreciated.

thanks,
Martin

-- 


~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
*     Martin Schmidt, Ph.D.                                   *
*     Department of Molecular Genetics and Biochemistry       *
*     University of Pittsburgh School of Medicine             *
*     Pittsburgh, PA 15261                                    *
*     Tel. (412) 648-9243                                     *
*     FAX  (412) 624-1401                                     *
*     Email mcs2@pitt.edu                                     *
*     www.pitt.edu/~mcs2/                                     *
*                                                             *
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