Bioperl: Parsing GenBank reports from NCBI.

[Lincoln Stein]

Hi Kutbuddin,

The BoulderIO modules can fetch and parse the detailed GenBank
records, along with Unigene, OMIM, Medline, SwissProt, BLAST and a few 
others.  I am releasing a new version of this in a few days, but the
older version is available at http://stein.cshl.org/

Lincoln

Kutbuddin Doctor writes:
 > Hi,
 > 
 > I have used Bio::DB::GenPept to retrieve and parse FASTA records from
 > NCBI. Are there other modules available (currently) that do the same for
 > the more detailed "GenBank" report?
 > 
 > I have corresponded with the author of the Bio::DB::GenPept who says such
 > a module will probably released with the new Bio::Seq module. I have no
 > idea when that will come about - so I though that maybe someone has thier
 > own solution. 
 > 
 > I would also be interested in code if anyone is willing to share thier
 > invention of this "wheel". I actually need the code for protein queries
 > rather than DNA. 
 > 
 > 
 > thanks,
 > Kutbuddin.
 > 
 > 
 > -<>--<>--<>--<>--<>--<>--<>--<>-
 > Kutbuddin S. Doctor, PhD 
 > Burnham Institute,
 > 10901 N. Torrey Pines Rd.,
 > La Jolla, CA 92037
 > Ph: (858) 646-3100 ext 3488
 >     (858) 550-0786 (H)
 > ksdoctor@burnham-inst.org
 > ksdoctor@sdsc.edu
 > -<>--<>--<>--<>--<>--<>--<>--<>-
 > 
 > 
 > 
 > 
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-- 
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Lincoln D. Stein                           Cold Spring Harbor Laboratory
lstein@cshl.org			                  Cold Spring Harbor, NY
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