Bioperl: read scf file
Aaron J Mackey
ajm6q@virginia.edu
Wed, 12 May 1999 11:50:13 -0400 (EDT)
Hmm, I've looked at the files you sent me, and they're not in SCF format,
they seem to be in some proprietary ABI PRISM format. Can you better
explain your situation?
-Aaron
On Wed, 12 May 1999, Aaron J Mackey wrote:
>
> I'd be willing to hack out a filter for you, that will work with the
> Bio::SeqIO streaming sequence system. Can you send me a couple of your
> files to play with?
>
> -Aaron
>
> On Wed, 12 May 1999, olivier DUGAS wrote:
>
> > Hello,
> >
> > I have more than 300 scf files and I need to export sequence from these files.
> > Does somebody know how to do that ?
> > Actually I'm using chromas, but the task is manual and so hard.
> >
> > definition of scf file :
> > http://www.ibc.wustl.edu/~states/standards/SCF-SPEC.V2.1
> >
> > --Olivier DUGAS.
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