Bioperl: read scf file

[Joe Ryan]

Oliver,

There are several Unix-only solutions.  I am not sure if there are any Perl 
solutions...

Phred&Phrap:  http://bozeman.mbt.washington.edu/index.html

Staden:       http://www.mrc-lmb.cam.ac.uk/pubseq/index.html

Bass:         http://www.genome.wi.mit.edu/ftp/distribution/software/Bass/doc/BASS.html

Regards,

Joe
--
Joseph Ryan
Programmer
National Human Genome Research Institute

On Wed, May 12, 1999 at 11:38:30AM +0200, olivier DUGAS wrote:
> 	Hello,
> 
> I have more than 300 scf files and I need to export sequence from these files.
> Does somebody know how to do that ?
> Actually I'm using chromas, but the task is manual and so hard.
> 
> definition of scf file :
> http://www.ibc.wustl.edu/~states/standards/SCF-SPEC.V2.1
> 
> --Olivier DUGAS.
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