Bioperl: BoulderIO version 1.10 available
Lincoln Stein
lstein@cshl.org
Wed, 18 Nov 1998 15:29:48 -0500
Hi All,
I've just made version 1.10 of BoulderIO available on my Web site at
http://stein.cshl.org/software/boulder/
New things that it does:
- an easily-parsed representation of GenBank/EMBL records,
complete with tools for searching and retrieving from local
and remote databases.
- an easily-parsed representation of BLAST and FASTA results,
complete with a tool for converting the WU version of BLAST
into this representation (sorry, NCBI and PSI-BLAST versions
coming), and a simple tool for performing M X N BLAST
searches.
Also, if anyone is interested in ACEDB connectivity, look into
AcePerl, which provides scriptable access to local and remote ACEDB
databases. It's a lot easier than dumping .ace files. See
http://stein.cshl.org/AcePerl/
Regards,
Lincoln
--
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Lincoln D. Stein Cold Spring Harbor Laboratory
lstein@cshl.org Cold Spring Harbor, NY
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