Bioperl: HTML linking into blast?
Rubin Eitan
bcrubin@dapsas1.weizmann.ac.il
Sat, 5 Dec 1998 02:10:03 +0200 (IST)
Sorry, this is not a bioperl Q, but where else am I going to find the
answer in real time?
I am trying to make web pages that will link to blast searches directly.
The idea is to put a link on each sequence, so that the user (me, and
only me) can pick a sequence and run it's blast in real time. Here is how
my links look like:
http://www.ncbi.nlm.nih.gov/cgi-bin/BLAST/nph-newblast?PROGRAM=blastn&DATALIB=nr
&INPUT_TYPE=Accession or GI&SEQUENCE=X85404
This url works when I use the LWP::UserAgent, but not as a link from an
html document. Should it work? Any idea what's wrong?
Eitan.
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Eitan Rubin,
Plant Genetics, Weizmann Inst of Science, Rehovot, Israel.
EMail: bcrubin@dapsas1.weizmann.ac.il
Tel: (00972)-(8)9342421 Fax: (00972)-(8)9344181
EitanR@BioMOO (http://bioinfo.weizmann.ac.il/BioMOO) - visit
the GCG help desk
in vivo -> in vitro -> in silico
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On Tue, 1 Dec 1998, Ewan Birney wrote:
>
> On Tue, 1 Dec 1998, gert thijs wrote:
>
> > I'm new to this list. So, is there a FAQ which I should read first before asking
> > question?
>
> Not yet, and we should get one.
>
> Browse around http://bio.perl.org/ and if you can't find your answer, ask
> again to this list and someone (at least me!) should give a response.
>
>
> Thanks for your inquiry...
>
>
> Ewan Birney
> <birney@sanger.ac.uk>
> http://www.sanger.ac.uk/Users/birney/
>
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