Bioperl: Module collections...

[Ewan Birney]

Hmmm...

Putting my bazaar hat on (as opposed to a cathederal menality)
I reckon even if the interfaces are going to change (and what
do you want changed in PreSeq.pm? For me this is a v.easy module)
we should still start calling things as Seq.pm and blast.pm 
and changes things as needed...

Simple objects == good objects. light weight sequence objects
are simple and I think PreSeq is fine... what else do you want
in it?

Currently I score 
	? Seq should be PreSeq or Seq 2 for PreSeq, 1 not
	? Blast in or out of the CVS 2 against, 1 for

We will do whater the consensus is ... but my simple align
module sits ontop of a Sequence module and life would be easy
if it was called seq.pm

Keep the discussion going... I'm happy to be persuaded otherwise...


Ewan Birney
<birney@sanger.ac.uk>
http://www.sanger.ac.uk/Users/birney/

=========== Bioperl Project Mailing List Message Footer =======
Project URL: http://www.techfak.uni-bielefeld.de/bcd/Perl/Bio/
For info about how to (un)subscribe, where messages are archived, etc:
http://www.techfak.uni-bielefeld.de/bcd/Perl/Bio/vsns-bcd-perl.html
====================================================================