Bioperl/ANNOUNCE Bioperl: Central distribution 0.05.1
Steve Chervitz
sac@neomorphic.com (Steve A. Chervitz)
Wed, 30 Jun 1999 02:45:18 -0700 (PDT)
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Bioperlers,
A new maintenance release of the central bioperl distribution is now
available (version 0.05.1). The complete list of changes is included
at the end of this message.
Bioperl release website: http://bio.perl.org/Core/Latest/
Download directly:
ftp://bio.perl.org/pub/DIST/bioperl-0.05.1.tar.gz (0.8M)
ftp://bio.perl.org/pub/DIST/bioperl-0.05.1.zip (1.0M)
or from Stanford:
ftp://genome-ftp.stanford.edu/pub/people/sac/bioperl/bioperl-0.05.1.tar.gz
ftp://genome-ftp.stanford.edu/pub/people/sac/bioperl/bioperl-0.05.1.zip
Cheers!
Steve A. Chervitz (on behalf of the Bioperl developers)
Bioperl Coordinator
sac@neomorphic.com
--
Revision history for Bioperl core modules (from the Changes file)
0.05.1 Tue Jun 29 05:30:44 1999
- Central distribution now requires Perl 5.004. This was
done to get around 5.003-based problems in Bio/Index/*
and SimpleAlign.
- Various bug fixes in the Bio::Tools::Blast modules
including better exception handling and PSI-Blast
support. See Bio/Tools/Blast/CHANGES for more.
- Fixed the Parse mechanism in Seq.pm to use readseq.
Follow the instructions in README for how to install
it (basically, you have to edit Parse.pm).
- Improved documentation of Seq.pm, indicating where
objects are returned and where strings are returned.
- Fixed uninitialized warnings in Bio::Root::Object.pm
and Bio::Tools::SeqPattern.pm.
- Bug fixes for PR#s: 30,31,33-35,41,42,44,45,47-50,52
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