[Biojava-l] Atom neighbors
Jose Duarte
jose.duarte at rcsb.org
Tue Dec 12 12:44:55 EST 2023
The tutorial contains a section on how to calculate contacts between atoms
of a structure:
https://github.com/biojava/biojava-tutorial/blob/master/structure/contact-map.md
Let us know if you have any troubles with that or other specific questions.
Jose
On Tue, 12 Dec 2023 at 07:03, Enrico Morelli <morelli at cerm.unifi.it> wrote:
> Dear,
>
> is there a way to get all the atoms that fall within 3.0A from a given
> atom (e.g. Zn) in the PDB.
>
>
> Thanks
> --
> -----------------------------------------------------------
> Enrico Morelli
> System Administrator | Programmer | Web Developer
>
> CERM - Polo Scientifico
> via Sacconi, 6 - 50019 Sesto Fiorentino (FI) - ITALY
> ------------------------------------------------------------
> _______________________________________________
> Biojava-l mailing list - Biojava-l at biojava.org
> https://mailman.open-bio.org/mailman/listinfo/biojava-l
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.open-bio.org/pipermail/biojava-l/attachments/20231212/9a89fc89/attachment.htm>
More information about the Biojava-l
mailing list