[Biojava-l] Fwd: [Biopython] Biopython website is down

Andreas Prlic andreas at sdsc.edu
Thu Apr 7 15:13:43 UTC 2016


Hi,

Biojava.org is down. Please see the related message from Peter on the
biopython mailing list.

Andreas

---------- Forwarded message ----------
From: *Peter Cock* <p.j.a.cock at googlemail.com>
Date: Thursday, April 7, 2016
Subject: [Biopython] Biopython website is down
To: Biopython Mailing List <biopython at mailman.open-bio.org>, BioPython-Dev
Mailing List <biopython-dev at mailman.open-bio.org>


Dear Biopythoneers,

I'm sorry to be the bearer of bad news:

We've got some problems on the main OBF web server, which has
been on AWS since 2012:

https://news.open-bio.org/2012/11/04/server-transition-to-aws/

This runs biopython.org, bioperl.org, biojava.org, biosql.org etc.
and will likely need a rebuild to get us back online again...

This will delay the planned Biopython 1.67 release - although we
could do it anyway on PyPI only, and share the Windows Installers
etc once the website is back?

Good news:

We'd already migrated the main OBF website www.open-bio.org
(aka www.obf.io) to a separately hosted MediaWiki site, and the OBF
news blog to a separately hosted WordPress site, news.open-bio.org
aka news.obf.io - so they are not affected.

Migration:

You may recall the AWS MediaWiki server would periodically fail
with a MySQL outage. Also we had some problems with the OpenID
authentication when Google dropped support for the legacy API.
In general keeping MediaWiki & WordPress up to date was a burden
and potential security problem.

This is why we started looking at migration options last year, with
a front-runner being GitHub pages for the project websites. I'll
write about that (and how people can help) in another email.

Regards,

Peter
_______________________________________________
Biopython mailing list  -  Biopython at mailman.open-bio.org <javascript:;>
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Dr. Andreas Prlic
RCSB PDB Protein Data Bank
Technical & Scientific Team Lead
University of California, San Diego

Editor Software Section
PLOS Computational Biology

BioJava Project Lead
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