[Biojava-l] Proteomic package in Biojava 3

[Andreas Prlic]

I think Digest and related classes have not been migrated to biojava 3 as
of yet. However that code for digesting sequences seems quite independent
and should be easy to migrate that over to biojava 3....

Andreas




On Wed, Mar 20, 2013 at 3:40 PM, wzhao6898 at gmail.com <wzhao6898 at gmail.com>wrote:

> Thanks for the reply, I'm actually interested in the Digest and related
> classes.
>
> DZ
>
> On Wed, Mar 20, 2013 at 3:33 PM, Andreas Prlic <andreas at sdsc.edu> wrote:
> > Hi,
> >
> > what functionality do you need exactly? There are several new modules in
> > biojava 3 that contain related functionality. Probably the closest might
> be
> >
> > biojava3-aa-prop  Physico chemial properties:
> >
> >
> http://biojava.org/wiki/BioJava:CookBook#Physico-Chemical_Properties_Computation
> >
> > Is this what you need?
> >
> > Andreas
> >
> >
> >
> >
> > On Wed, Mar 20, 2013 at 2:10 PM, wzhao6898 at gmail.com <
> wzhao6898 at gmail.com>
> > wrote:
> >>
> >> Hi there,
> >>
> >> Maybe this has been discussed before, but where can I find the
> >> proteomic package that was in version 1.8.2?
> >> Thanks,
> >>
> >> DZ
> >> _______________________________________________
> >> Biojava-l mailing list  -  Biojava-l at lists.open-bio.org
> >> http://lists.open-bio.org/mailman/listinfo/biojava-l
> >
> >
> >
> >
>