[Biojava-l] Chromatagraph reading in BioJava3?

[Nick England]

Thanks for the help, 1.8.1 seems to have the classes I need. But I
haven't been able to get maven to work with biojava 1.8. It works fine
with 3.X, but when I try to use the dependency:
		<dependency>
			<groupId>org.biojava</groupId>
			<artifactId>biojava-legacy</artifactId>
			<version>1.8.1</version>
		</dependency>
it fails, even though there appears to be the corresponding pom on the
repository at http://www.biojava.org/download/maven/org/biojava/biojava-legacy/1.8.1/

I have the repo at :
                 <repository>
			<id>biojava-maven-repo</id>
			<name>BioJava repository</name>
			<url>http://www.biojava.org/download/maven/</url>
		</repository>

Am I doing something wrong, or has the release version 1.8.1 somehow
broken on the repository?

Thanks,

Nick

On 12 March 2012 16:43, Andreas Prlic <andreas at sdsc.edu> wrote:
> Hi Nick,
>
> this feature has not been ported to biojava3 so far and you can get it
> via biojava 1.8.1
>
> Andreas
>
> On Mon, Mar 12, 2012 at 8:04 AM, Nick England <nickengland at gmail.com> wrote:
>> Hello all,
>>
>> I am trying to read some .scf files into BioJava3. I have found the
>> example code for 1.3
>> (http://biojava.org/wiki/BioJava:Cookbook:SeqIO:ABItoSequence) but I
>> can't find any classes in the 3.0 API which look at all related to
>> those ones. Is it possible, or should I downgrade to 1.3 if I want to
>> be able to read .scf files?
>>
>> Thanks,
>>
>> Nick
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