[Biojava-l] JavaDocs and Backwards compatibility

[Jay Vyas]

Thanks, I am now all up to date with biojava 3.0 and it really works well.

It really would be valuable to have some public biojava java docs !

This is because, for example, when I completely removed biojava 1.7, and
replaced it with biojava 3.0,  it was somewhat tedious to refactor/find old
classes under new package names, for example :

For example,

 org.biojava3.alignment.
SimpleSubstitutionMatrix;
 org.biojava3.alignment.template.SubstitutionMatrix;