[Biojava-l] Getting numeric quality values from fastq

Wang, Han wangh5 at muohio.edu
Tue May 11 19:21:54 UTC 2010


Dear someone concerned:
I am new to biojava. I faced some problems on the numrica values of the fastq file. I read the biojava API and found how to read in the fastq file and get the quality from each fastq reads. Unfortunately, it just reads the sequence of the original quality sequence rather numeric quality values. Can someone give me some help on this problem? I will really appreciate.

Sincerely
Han



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