[Biojava-l] Retrieving AUTHOR information from PDB file

Andreas Prlic andreas at sdsc.edu
Thu Jul 9 04:21:49 UTC 2009


Hi Andrew,

The PdbFileParser at the present does not process the AUTHOR lines, yet, but
should be easy to add.. If you need this urgently, you could quickly patch
the PdbFileParser, otherwise I'll add it to SVN in the next couple of
days...

Andreas

On Wed, Jul 8, 2009 at 11:38 AM, Andrew Clegg <andrew at nervechannel.com>wrote:

> Hopefully this isn't a FAQ but I couldn't find it via Google.
>
> I'm parsing PDB files with PDBFileReader. I want to extract the AUTHOR
> line(s) but I can't find a way to do this.
>
> You can get the corresponding JRNL field with
> Structure#getJournalArticle() but the authors of this aren't
> necessarily the same as the authors of the structure itself.
>
> Any ideas? I'm probably just being shortsighted and overlooking
> something...
>
> Thanks!
>
> Andrew.
>
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