[Biojava-l] GFF Parsing

benn benn at mpi-cbg.de
Wed Jun 4 09:56:17 UTC 2008


          I am investigating the user of biojava for file parsing for 
in-house apps in my organisation.  I have previously used biojava but if 
I am looking at a new implementation then I would like to use biojavax.  
I have managed to parse a fasta file with no problems but I now need to 
parse gff.  I cannot see a parser for gff in biojavax, would I need to 
implement a new parser which works with the biojavax IOTools and rich 
sequence or can I use the parser from biojava2 in some way?



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