[Biojava-l] WriteFasta

[Richard Holland]

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SeqIOTools is deprecated.

Try RichSequence.IOTools.writeFasta() instead to see if that helps.

e.g.:

RichSequence.IOTools.writeFasta(
	System.out,
	seq,
	RichObjectFactory.getDefaultNamespace()
	);

where seq is either a Sequence or a SequenceIterator.

cheers,
Richard

Saif Ur-Rehman wrote:
> Dear All,
> 
> I was writing to ask about the SeqIOTools.writeFasta() Method. I am currently
> trying to break up Fasta Files of whole organisms into one file per gene for
> further analysis. However the writeFasta method appears to append the
> characters
> "¨Ì
> 
> ------------------------------------------------------------------
> University of St Andrews Webmail: https://webmail.st-andrews.ac.uk
> 
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> 
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