[Biojava-l] Need Help

[Goh khee Teck]

Hi..

Anybody know how to retrieve the annotation property
"ORIGIN"

My code look like this

while(sequences.hasNext()){
try {

seq = sequences.nextSequence();
//Annotation
Annotation anno = seq.getAnnotation();

//print each key value pair
for (Iterator i = anno.keys().iterator(); i.hasNext();
) {
Object key = i.next();

System.out.println(key +" : "+ anno.getProperty(key));
}//for
}//while

It print out the value for each annotation key but for
ORIGIN, there is nothing.

ORIGIN FOR A typical genbank file SCU49845
looks like
ORIGIN
        1 gatcctccat atacaacggt atctccacct caggtttaga tctcaacaac ggaaccattg
       61 ccgacatgag acagttaggt atcgtcgaga gttacaagct aaaacgagca gtagtcagct
      121 ctgcatctga agccgctgaa gttctactaa gggtggataa catcatccgt gcaagaccaa
      181 gaaccgccaa tagacaacat atgtaacata tttaggatat acctcgaaaa taataaaccg
      241 ccacactgtc attattataa ttagaaacag aacgcaaaaa ttatccacta tataattcaa
      301 agacgcgaaa aaaaaagaac aacgcgtcat agaacttttg gcaattcgcg tcacaaataa
      361 attttggcaa cttatgtttc ctcttcgagc agtactcgag ccctgtctca agaatgtaat
      421 aatacccatc gtaggtatgg ttaaagatag catctccaca acctcaaagc tccttgccga
      481 gagtcgccct cctttgtcga gtaattttca cttttcatat gagaacttat tttcttattc
      541 tttactctca catcctgtag tgattgacac tgcaacagcc accatcacta gaagaacaga
      601 acaattactt aatagaaaaa ttatatcttc ctcgaaacga tttcctgctt ccaacatcta
      661 cgtatatcaa gaagcattca cttaccatga cacagcttca gatttcatta ttgctgacag
      721 ctactatatc actactccat ctagtagtgg ccacgcccta tgaggcatat cctatcggaa


Regards
KheeTeck

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