[Biojava-l] Graph library

[Michael Heuer]

Mark Schreiber wrote:

> Does anyone know of a good java graph library that is LGPL, Apache license
> or similar? Not data graphing but graph as in the mathematical construct.

Matthew Pocock wrote one in bjv2, package org.bjv2.graph, which he uses
for metabolic network support, package org.bjv2.metabolic.  In subversion
at

http://www.derkholm.net/svn/repos/bjv2/trunk/data/src/main/java/org/bjv2/graph/
http://www.derkholm.net/svn/repos/bjv2/trunk/biological/src/main/java/org/bjv2/metabolic/

I wrote another graph library with generics, in cvs at

https://dsh-lib.dev.java.net/source/browse/dsh-lib/graph

There is an Apache Commons sandbox project called graph2, in subversion at

http://svn.apache.org/viewcvs.cgi/jakarta/commons/dormant/graph2/trunk/

   michael