[Biojava-l] modify structure
Andreas Prlic
ap3 at sanger.ac.uk
Thu Dec 1 03:54:41 EST 2005
Hi Tamas,
it is possible to access the content of a structure and
change/add/drop groups and atoms as you wish.
When talking about introducing "point mutations" I assume you want to
re-label a residue's main chain
atoms and drop the side chain atoms, but keep the Cb one? this would
take only a few lines to implement.
Cheers,
Andreas
On 30 Nov 2005, at 16:21, Tamas Horvath wrote:
> Is there any way to modify a protein structure by modifying the
> contents ofthe Structure object?In short, I have a Structure object,
> parsed from a pdb file, and I want tointroduce point mutations to it,
> and save the modified structure to a pdbfile for further analysis...
> (I intend to use gromacs for instance if itmatters)...
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Andreas Prlic Wellcome Trust Sanger Institute
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