[Biojava-l] cvs download

[mark.schreiber at novartis.com]

Hello -

To get biojava I would suggest you would need to do this:

cvs -d :pserver:cvs at cvs.open-bio.org:/home/repository/biojava checkout 
biojava-live

to get biojava-lims (although I don't think this project is still active)

cvs -d :pserver:cvs at cvs.open-bio.org:/home/repository/biojava checkout 
biojava-lims

to upate, navigate to where ever you checked out biojava-live and do this:

cvs -Pd update

The -P will remove any empty directories on the CVS tree (there are a few 
so this is highly recommended)
The -d will treat your current directory as CVS_ROOT.

To set your class path see http://www.biojava.org/started.html although it 
looks like you have done that successfully.

- Mark





"D.Enrique ESCOBAR ESPINOZA" <escobarebio at yahoo.com>
Sent by: biojava-l-bounces at portal.open-bio.org
12/01/2005 02:53 PM

 
        To:     biojava-l at biojava.org
        cc:     (bcc: Mark Schreiber/GP/Novartis)
        Subject:        [Biojava-l] cvs download


i put the files:
    *  bytecode-0.92.jar
    * commons-cli.jar
    * commons-collections-2.1.jar
    * commons-dbcp-1.1.jar
    * commons-pool-1.1.jar
in my biojava directory: C:\biojava
is set my classpath
set CLASSPATH C:\biojava\biojava.jar;C:\biojava\bytecode-0.92.jar;
C:\biojava\commons-cli.jar;C:\biojava\commons-collections-2.1.jar;
C:\biojava\commons-dbcp-1.1.jar;
C:\biojava\commons-pool-1.1.jar;.
i ve done
> C:
i ve done
> cd biojava/
i ve done
>cvs -d :pserver:cvs at cvs.open-bio.org:/home/repository/bioperl login
when prompted, the password is 'cvs'
i ve done
> cvs -d :pserver:cvs at cvs.open-bio.org:/home/repository/bioperl
checkout bioperl-live
i ve check the new folders created:
>a folder named bioperl-live/ has been created
i ve done
>$ cvs update
cvs [update aborted]: C:/MYCVSROOT/CVSROOT: No such file or directory
WHAT IS SUPPOSE TO BE MY CVSROOT directory?
HOW AM I SUPPOSE TO SET MY CLASSPATH?
WHAT I DO FOR OTHER MODULES LIKE BIOJAVA-LIMS?
thanks

--------------------------------------------------
D.Enrique ESCOBAR ESPINOZA (B.Sc.) 
http://adn.bioinfo.uqam.ca/~escd07097301/
http://spaces.msn.com/members/escobarebio/
ICQ#: 201778618
-------------------------------------------------
Tel:  (514) 523-8398
Montreal QC Canada


 
 
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